Protein knowledgebaseSequence archiveHelp pages, FAQs, UniProtKB manual, documents, news archive and Biocuration projects.Sequence clustersProtein sets from fully sequenced genomesAnnotation systemsSystems used to automatically annotate proteins with high accuracy:Supporting dataSelect one of the options below to target your search:You are using a version of browser that may not display all the features of this website. Please consider upgrading . Transcription factor RLM1RLM1Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveliFunctioniMay function as a transcription factor downstream of MPK1 that is subject to activation by the MPK1 mitogen-activated protein kinase pathway. Binds to the DNA sequence 5'-CTA[TA]4TAG-3'. At least some RML1 target genes are involved in cell wall biosynthesis.Manual assertion based on experiment ini"Characterization of a serum response factor-like protein in Saccharomyces cerevisiae, Rlm1, which has transcriptional activity regulated by the Mpk1 (Slt2) mitogen-activated protein kinase pathway.", , , ,
[] [] []Cited for: FUNCTION, PHOSPHORYLATION, INTERACTION WITH KDX1 AND SLT2.MiscellaneousPresent with 736 molecules/cell in log phase SD medium.Manual assertion based on experiment ini"Global analysis of protein expression in yeast.", , , , , , ,
[] [] []Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].RegionsFeature keyPosition(s)DescriptionActionsGraphical viewLengthDNA bindingiMef2-type 30GO - Molecular functioniInferred from direct assayiInferred from physical interactioniInferred from direct assayiInferred from direct assayiGO - Biological processiInferred from direct assayiInferred from direct assayiInferred from mutant phenotypeiKeywordsiMolecular functionBiological process, Enzyme and pathway databasesBioCyci Names & TaxonomyiProtein namesiRecommended name:Transcription factor RLM1Gene namesiName:Ordered Locus Names:YPL089CORF Names:LPG19COrganismiTaxonomic identifieri
[]Taxonomic lineagei >
Proteomesi Componenti: Chromosome XVI Organism-specific databasesEuPathDBi SGDi RLM1. Subcellular locationi
Extracellular region or secreted
Plasma membrane
Cytoskeleton
Peroxisome
Mitochondrion
Manual annotation
Automatic computational assertionGraphics by Christian S Source: Keywords - Cellular componentiPTM / ProcessingiMolecule processingFeature keyPosition(s)DescriptionActionsGraphical viewLengthChainiPRO_Transcription factor RLM1 676Amino acid modificationsFeature keyPosition(s)DescriptionActionsGraphical viewLengthModified residueiPhosphoserineManual assertion inferred from combination of experimental and computational evidencei"Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution.", , , , ,
[] [] []Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-120; SER-374 AND SER-377, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].1Modified residueiPhosphoserineManual assertion inferred from combination of experimental and computational evidencei"Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.", , , , , , ,
[] [] []Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-164; SER-374 AND SER-377, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].1Modified residueiPhosphoserineManual assertion inferred from combination of experimental and computational evidencei"Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.", , , , , , ,
[] [] []Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-164; SER-374 AND SER-377, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]."A multidimensional chromatography technology for in-depth phosphoproteome analysis.", , , , ,
[] [] []Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-374, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]."Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution.", , , , ,
[] [] []Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-120; SER-374 AND SER-377, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].1Modified residueiPhosphoserineManual assertion inferred from combination of experimental and computational evidencei"Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.", , , , , , ,
[] [] []Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-164; SER-374 AND SER-377, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]."Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution.", , , , ,
[] [] []Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-120; SER-374 AND SER-377, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].1Post-translational modificationiPhosphorylated by SLT2.Manual assertion based on experiment ini"Characterization of a serum response factor-like protein in Saccharomyces cerevisiae, Rlm1, which has transcriptional activity regulated by the Mpk1 (Slt2) mitogen-activated protein kinase pathway.", , , ,
[] [] []Cited for: FUNCTION, PHOSPHORYLATION, INTERACTION WITH KDX1 AND SLT2.Keywords - PTMiProteomic databasesMaxQBi PRIDEi PTM databasesiPTMneti InteractioniSubunit structureiCan heterodimerize with SPM1. Interacts with KDX1 and SLT2.Manual assertion based on experiment ini"Characterization of a serum response factor-like protein in Saccharomyces cerevisiae, Rlm1, which has transcriptional activity regulated by the Mpk1 (Slt2) mitogen-activated protein kinase pathway.", , , ,
[] [] []Cited for: FUNCTION, PHOSPHORYLATION, INTERACTION WITH KDX1 AND SLT2.GO - Molecular functioniInferred from physical interactioniProtein-protein interaction databasesBioGridi 107 interactors.DIPi ELMi IntActi 12 interactors.MINTiMINT-2781402. STRINGi Structurei3D structure databasesProteinModelPortali SMRi ModBaseiMobiDBiFamily & DomainsiDomains and RepeatsFeature keyPosition(s)DescriptionActionsGraphical viewLengthDomainiMADS-boxManual assertion according to rulesi 55Compositional biasFeature keyPosition(s)DescriptionActionsGraphical viewLengthCompositional biasiPoly-Asp6Compositional biasiPoly-Gln6Compositional biasiPoly-Ser8Compositional biasiPoly-Asn4Compositional biasiPoly-Asn 13Sequence similaritiesiBelongs to the .Phylogenomic databasesGeneTreei InParanoidi KOi OMAi OrthoDBi Family and domain databasesCDDi MADS_MEF2_like. 1 hit. Gene3Di 1 hit. InterProi MADS_MEF2-like.
TF_MADSbox.
TF_MADSbox_sf. Pfami SRF-TF. 1 hit. PRINTSi MADSDOMAIN. SMARTi MADS. 1 hit. SUPFAMi SSF55455. 1 hit. PROSITEi MADS_BOX_1. 1 hit.
MADS_BOX_2. 1 hit. SequenceiSequence statusi: Complete.Q12224-1 []
50MGRRKIEIQR ISDDRNRAVT FIKRKAGLFK KAHELSVLCQ VDIAVIILGS
100NNTFYEFSSV DTNDLIYHYQ NDKNLLHEVK DPSDYGDFHK SASVNINQDL
150LRSSMSNKPS KSNVKGMNQS ENDDDENNDE DDDDHGNFER NSNMHSNKKA
200SDKNIPSAHM KLLSPTALIS KMDGSEQNKR HPENALPPLQ HLKRLKPDPL
250QISRTPQQQQ QQNISRPYHS SMYNLNQPSS SSSSPSTMDF PKLPSFQNSS
300FNGRPPPISI SPNKFSKPFT NASSRTPKQE HKINNSGSNN NDNSNYTQSP
350SNSLEDSIQQ TVKARRKLSA RPVLRVRIPN NNFSSNSAIP SEPSSASSTS
400ANGNSMGSSQ IMKENKTSRS SKISPLSASA SGPLTLQKGN NGRMVIKLPN
450ANAPNGSNNG NGSNNNNHPY PFGSGSSPLF SATQPYIATP LQPSNIPGGP
500FQQNTSFLAQ RQTQQYQQMS FKKQSQTVPL TTTLTGRPPS TFSGPETSNG
550PPTGSLPSKF VHDLMSNSPN VSSISMFPDW SMGPNSAKPG NTNNPGTFPP
600VQTAVNNGNS SNISSTNNTN NNNNNNNNNS SNNNSNNGND NNSNNSNNSY
650YSNNEDAPVN GAAISEHTTD GDSNNQSNSS TYDAAATAYN GNTGLTPYIN
670 TAQTPLGTKF FNFSTDISGE KNSSKI
67673,484November 1, 1996 - v1Checksum:i9CE6B3DEBLASTProtParamProtScaleCompute pI/MWPeptideMassPeptideCutterSequence databasesSelect the link destinations:EMBLiGenBankiDDBJi Genomic DNA. Translation: . Genomic DNA. Translation: . Genomic DNA. Translation: .PIRi RefSeqi Genome annotation databasesEnsemblFungii; ; . GeneIDi KEGGi Similar proteinsi Genomic DNA. Translation: . Genomic DNA. Translation: . Genomic DNA. Translation: .PIRi RefSeqi 3D structure databasesProteinModelPortali SMRi ModBaseiMobiDBiProtein-protein interaction databasesBioGridi 107 interactors.DIPi ELMi IntActi 12 interactors.MINTiMINT-2781402. STRINGi PTM databasesiPTMneti Proteomic databasesMaxQBi PRIDEi Protocols and materials databasesStructural Biology KnowledgebaseGenome annotation databasesEnsemblFungii; ; . GeneIDi KEGGi Organism-specific databasesEuPathDBi SGDi RLM1. Phylogenomic databasesGeneTreei InParanoidi KOi OMAi OrthoDBi Enzyme and pathway databasesBioCyci Miscellaneous databasesPROi Family and domain databasesCDDi MADS_MEF2_like. 1 hit. Gene3Di 1 hit. InterProi MADS_MEF2-like.
TF_MADSbox.
TF_MADSbox_sf. Pfami SRF-TF. 1 hit. PRINTSi MADSDOMAIN. SMARTi MADS. 1 hit. SUPFAMi SSF55455. 1 hit. PROSITEi MADS_BOX_1. 1 hit.
MADS_BOX_2. 1 hit. ProtoNetiMiscellaneousiKeywords - Technical termi, Documents
Index of protein domains and families
Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
Yeast (Saccharomyces cerevisiae) chromosome XVI: entries and gene names正常安装 Redshift
正常安装Redshift解压 RLM到做任意位置. (例如: C:\redshift_rlm)以管理员权限打开命令提示符窗口。在命令窗口改变目录进入到解压好的文件夹内(例如: 进入到C:\redshift_rlm)然后输入如下命令来告诉rlm服务来安装它自己作为一个服务rlm -install_service -service_name RLM-Redshift -dlog +rlm.log你必须启动RLM-Redshift服务(只第一次运行时需要这样做).net start RLM-Redshift
创建系统环境变量:变量名:&redshift_LICENSE变量值:&5053@localhost
Done. Enjoy&All credits to uncia and Hawkeye(for sharing)
可以记录推荐数据哦！
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